Chromotek-GFP-Trap®

Chromotek-GFP-Trap? is a high quality, single domain GFP-binding protein coupled to a monovalent matrix.

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RNAi Validation and Screening

Genetic screening through RNA interference (RNAi) directly target genes in selected pathways or even all human genes provides the benefits of relatively high specificity and success rate.
RNAi refers to double-stranded (dsRNA)-induced gene silencing, a cellular process that degrades RNA homologous to one strand of the dsRNA. The intermediates of long dsRNA-initiated RNAi are double-stranded small interfering RNAs (siRNA), typically 21-23 nucleotide (nt) long. The siRNAs can be used to silence genes in mammalian systems where long dsRNAs prompt non-specific RNA degradation and general shutdown of protein synthesis.
siRNAs can either be chemically synthesized then directly transfected into cells or can be generated inside the cell from vectors that express short-hairpin RNA (shRNA), precursors of siRNAs. The process of shRNA into functional siRNA involves cellular RNAi machinery that naturally process genome encoded microRNAs (miRNA), which are responsible for cellular regulation of gene expression by modulating mRNA stability, translation, and chromatin structures.

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Or read below about what Allele offers.
Only Issused Pantent for PolIII based RNAi

Protected under US patents 7,294,504 and 7,422,896, Allele´s RNAi System was invented by Allele scientists in 2001. In addition to its proven high efficiency, accuracy, and low cost, it has several major advantages over other shRNA expression technologies:

  • Supplied as pre-cut linear vector ready to ligate, with nearly zero self-ligation background.
  • No restriction sites are used, leaving no alteration of the U6 promoter or additional bases to the shRNA, resulting in optimal RNAi.
  • Three versions available: Vector, Retrovirus and Lentivirus, accompanied with a designed Validation Reporter System
HiTiter™ Lentiviral Expression System

Allele Biotech provides RNAi screening services based on its patented shRNA technology because its uses have been widely tested in many cancer relevant systems. In most cases we recommend the use of Allele´s lentiviral vector for shRNA that is ready-to-ligate and can be packaged at very high titer in small cultures. For an cost-efficient custom project to succeed several obstacles must be overcome with optimal combinations of the most suitable technologies for each step

More about Lentiviral RNAi Platform  

  • Design of RNAi targets
  • High throughput cloning
  • Viral particle production
  • RNAi screening
Efficient Virus Packaging System

Allele Biotech uses the most efficient packaging methods to prepare high titer retrovirus or lentivirus particles. Already provided under Allele Viral Packaging Services, these technologies are also available for RNAi screening projects through Allele’s RNAi Validation/Screening Services. Allele’s pLICO and pCHAC lentivirus and retrovirus systems have integrated the most advanced knowledge of using these viruses safely and effectively as gene or RNAi delivery vehicles, and been widely used by thousands of labs around the world. Choosing Allele’s systems maximize the chances of success of RNAi screening projects.
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Fluorescent Protein Reporters

One of the main advantages that Allele Biotech provides to its RNAi customers is the availability of some of the very best fluorescent proteins (FP) as reporters. For instance, a surrogate reporter with target transcript and FP fusion can be created for quick analysis of RNAi effects, while lentiviral shRNA vectors can have another FP for transduction tracking and normalization. Currently Allele Biotech has the brightest teal/cyan FP mTFP1, green fluorescent protein mWasabi, yellow and red FPs from Amphioxus, and a soon to be disclosed photoconvertible FP. A license for use of these FPs can be obtained separately or incorporated with a CRO RNAi project.

RNAi Validation Reporter System  

RNAi Screening Using Linear DNA Template in Cell Arrays

Pol III promoter-driven expression of shRNA or siRNA strands can be achieved by creating an expression cassette on a PCR product such as Allele’s LineSilence. The linear DNA molecule can be linked through PCR primers to peptides that on one end immobilize the DNA molecule on the surface of an array, and on the other end lead to efficient cell transduction. This technology was invented by Allele Biotech. A US patent has been allowed in 2009 and it is now offered to customers for low cost and high-throughput RNAi screening in cultured cells.

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